MoonFinder (version 1.0.3)

moduleCombiding: Combine modules from different resources.

Description

Combine modules with high overlapping score.

Usage

moduleCombiding(inputList, OScutoff = 0.5)

Arguments

inputList

a list of protein modules.

OScutoff

the threshold of overlapping score.

Value

outputList

a list of combined modules.

Details

Combine modules from different resources. For example, one set is computational predicted while the other sets are collected from databases.

References

MoonFinder: a framework for the identification of moonlighting non-coding RNAs.

Examples

# NOT RUN {
m1 = c("Q15021", "Q9BPX3", "Q15003", "O95347", "Q9NTJ3")
m2 = c("Q92828", "Q13227", "O15379", "O75376", "O60907", "Q9BZK7")
m3= c("P61160", "P61158", "O15143", "O15144", "O15145", "P59998", "O15511")
m4 = c("Q92828", "Q13227", "O15379", "O75376", "Q15021")
m5= c("P61160", "P61158", "O15143", "O15144", "O15145", "Q9NTJ3")
mList1 = list(m1,m2,m3,m4,m5)
mList2 = moduleCombiding(mList1,OScutoff = 0.5)
head(mList2)
# }