can.sig.go

Example functional gene sets (FGS) from GO and KEGG

datasets

Performs network enrichment analysis against functional gene sets.
Benchmarks networks. Renders raw gene profile matrices of dimensionality "N genes
x N samples" into the space of gene set (typically pathway) enrichment scores of
dimensionality "N pathways x N samples".

Ashwini Jeggari

NEArender

Network Enrichment Analysis

Andrey Alexeyenko

can.sig.go function

An object, i.e. a list with FGS IDs as names and vectors of gene IDs as member (34 FGSs in total). See see <code><a rd-options="" href="/link/import.gs?package=NEArender&version=1.5" data-mini-rdoc="NEArender::import.gs">import.gs</a></code>

Format

Example functional gene sets (FGS) from GO and KEGG — can.sig.go

An object, i.e. a list with FGS IDs as names and vectors of gene IDs as member (34 FGSs in total). See see <code><a rd-options='' href='import.gs'>import.gs</a></code>

can.sig.go: Example functional gene sets (FGS) from GO and KEGG

Description

Usage

Arguments

Format

Examples