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NSA (version 0.0.31)
Post-normalization of total copy numbers
Description
Post-normalization of total copy-number estimates.
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Version
0.0.32
0.0.31
0.0.3
0.0.2
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Install
install.packages('NSA')
Monthly Downloads
40
Version
0.0.31
License
LGPL (>= 2.1)
Maintainer
Maria Ortiz-Estevez
Last Published
October 4th, 2012
Functions in NSA (0.0.31)
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NSA-package
Package NSA
Non-documented objects
Non-documented objects
SNPsNormalization
The SNPsNormalization class
fitNSA.matrix
Find normal regions
process.SampleNormalization
Finds normal regions within tumoral samples
SampleNormalization
The SampleNormalization class
sampleNByTotalAndFracB.numeric
Normalize total copy numbers by samples (total,fracB)
process.NSANormalization
Finds normal regions within tumoral samples
NSAByTotalAndFracB.matrix
Finds normal regions within tumoral samples (total,fracB)
NSANormalization
The NSANormalization class
snpsNByTotalAndFracB.matrix
Normalize allele-specific copy numbers (total,fracB)