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NanoStringNorm (version 1.0.5)
Normalize NanoString miRNA and mRNA data
Description
The function is used to Normalize Nanostring data
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Install
install.packages('NanoStringNorm')
Monthly Downloads
296
Version
1.0.5
License
GPL-2
Maintainer
Daryl Waggott
Last Published
October 14th, 2011
Functions in NanoStringNorm (1.0.5)
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output.formatting
output.formatting
get.geo.mean
get.geo.mean
Plot.NanoStringNorm
Plot.NanoStringNorm
get.mean.sd.and.cv
get.mean.sd.and.cv
NanoString
An rda file storing NanoString example datasets. Curreintly, a data.frame consisting of Nanostring Rat RNA expression values. The data were exported as a tab delimited file from the XLS results.
background.normalization
background.normalization
NanoStringNorm-package
A set of functions for Normalization of Nanostring miRNA and RNA expression levels. Currently, only one function "NanoStringNorm" is used for all combinations of Normalization.
other.normalization
other.normalization
get.gene.summary.stats
get.gene.summary.stats
NanoStringNorm
NanoStringNorm
predict.concentration
predict.concentration
NanoString.mRNA
A data.frame consisting of Nanostring Rat RNA expression values. The data were exported as a tab delimited file from the XLS results.
code.count.normalization
code.count.normalization
sample.content.normalization
sample.content.normalization
get.batch.effects
get.batch.effects
probe.correction.factor
probe.correction.factor
get.trait.summary.stats
get.trait.summary.stats
get.beta.se.and.p
get.beta.se.and.p
get.sample.summary.stats
get.sample.summary.stats
get.ttest.and.foldchange
get.ttest.and.foldchange