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NanoStringNorm (version 1.0.5)

Normalize NanoString miRNA and mRNA data

Description

The function is used to Normalize Nanostring data

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Version

Install

install.packages('NanoStringNorm')

Monthly Downloads

12

Version

1.0.5

License

GPL-2

Maintainer

Daryl Waggott

Last Published

October 14th, 2011

Functions in NanoStringNorm (1.0.5)

output.formatting

output.formatting
get.geo.mean

get.geo.mean
Plot.NanoStringNorm

Plot.NanoStringNorm
get.mean.sd.and.cv

get.mean.sd.and.cv
NanoString

An rda file storing NanoString example datasets. Curreintly, a data.frame consisting of Nanostring Rat RNA expression values. The data were exported as a tab delimited file from the XLS results.
background.normalization

background.normalization
NanoStringNorm-package

A set of functions for Normalization of Nanostring miRNA and RNA expression levels. Currently, only one function "NanoStringNorm" is used for all combinations of Normalization.
other.normalization

other.normalization
get.gene.summary.stats

get.gene.summary.stats
NanoStringNorm

NanoStringNorm
predict.concentration

predict.concentration
NanoString.mRNA

A data.frame consisting of Nanostring Rat RNA expression values. The data were exported as a tab delimited file from the XLS results.
code.count.normalization

code.count.normalization
sample.content.normalization

sample.content.normalization
get.batch.effects

get.batch.effects
probe.correction.factor

probe.correction.factor
get.trait.summary.stats

get.trait.summary.stats
get.beta.se.and.p

get.beta.se.and.p
get.sample.summary.stats

get.sample.summary.stats
get.ttest.and.foldchange

get.ttest.and.foldchange