bkRNA18

Please refer to the file /inst/doc/readme.pdf.

datasets

It provides a framework and a fast and simple way for researchers to evaluate methods (particularly some data-driven methods or their own methods) and then select a best one for data normalization in the gene expression analysis, based on the consistency of metrics and the consistency of datasets.
Zhenfeng Wu, Weixiang Liu, Xiufeng Jin, Deshui Yu, Hua Wang, Gustavo Glusman, Max Robinson, Lin Liu, Jishou Ruan and Shan Gao (2018) <doi:10.1101/251140>.

Shan Gao

NormExpression

Normalize Gene Expression Data using Evaluated Methods

bkRNA18 function

A data frame with 57955 observations on the following 18 variables.<dl>
 <dt><code>col36l6_1</code></dt>
<dd>a numeric vector</dd> <dt><code>col38l6_3</code></dt>
<dd>a numeric vector</dd> <dt><code>col39l6_5</code></dt>
<dd>a numeric vector</dd> <dt><code>col40l6_7</code></dt>
<dd>a numeric vector</dd> <dt><code>col44l6_9</code></dt>
<dd>a numeric vector</dd> <dt><code>col45l6_11</code></dt>
<dd>a numeric vector</dd> <dt><code>col47l6_13</code></dt>
<dd>a numeric vector</dd> <dt><code>col48l6_97</code></dt>
<dd>a numeric vector</dd> <dt><code>col52l6_17</code></dt>
<dd>a numeric vector</dd> <dt><code>col36l6_2</code></dt>
<dd>a numeric vector</dd> <dt><code>col38l6_4</code></dt>
<dd>a numeric vector</dd> <dt><code>col39l6_6</code></dt>
<dd>a numeric vector</dd> <dt><code>col40l6_8</code></dt>
<dd>a numeric vector</dd> <dt><code>col44l6_10</code></dt>
<dd>a numeric vector</dd> <dt><code>col45l6_12</code></dt>
<dd>a numeric vector</dd> <dt><code>col47l6_14</code></dt>
<dd>a numeric vector</dd> <dt><code>col48l6_98</code></dt>
<dd>a numeric vector</dd> <dt><code>col52l6_18</code></dt>
<dd>a numeric vector</dd> 
</dl>

Format

bkRNA18 — bkRNA18

A data frame with 57955 observations on the following 18 variables.<dl>
 <dt><code>col36l6_1</code></dt>
<dd>a numeric vector</dd>

 <dt><code>col38l6_3</code></dt>
<dd>a numeric vector</dd>

 <dt><code>col39l6_5</code></dt>
<dd>a numeric vector</dd>

 <dt><code>col40l6_7</code></dt>
<dd>a numeric vector</dd>

 <dt><code>col44l6_9</code></dt>
<dd>a numeric vector</dd>

 <dt><code>col45l6_11</code></dt>
<dd>a numeric vector</dd>

 <dt><code>col47l6_13</code></dt>
<dd>a numeric vector</dd>

 <dt><code>col48l6_97</code></dt>
<dd>a numeric vector</dd>

 <dt><code>col52l6_17</code></dt>
<dd>a numeric vector</dd>

 <dt><code>col36l6_2</code></dt>
<dd>a numeric vector</dd>

 <dt><code>col38l6_4</code></dt>
<dd>a numeric vector</dd>

 <dt><code>col39l6_6</code></dt>
<dd>a numeric vector</dd>

 <dt><code>col40l6_8</code></dt>
<dd>a numeric vector</dd>

 <dt><code>col44l6_10</code></dt>
<dd>a numeric vector</dd>

 <dt><code>col45l6_12</code></dt>
<dd>a numeric vector</dd>

 <dt><code>col47l6_14</code></dt>
<dd>a numeric vector</dd>

 <dt><code>col48l6_98</code></dt>
<dd>a numeric vector</dd>

 <dt><code>col52l6_18</code></dt>
<dd>a numeric vector</dd>

 
</dl>

bkRNA18: bkRNA18

Description

Usage

Arguments

Format

Examples