scoreOxBS: Score function for C/5mC/5hmC likelihood estimator
Description
Score function for C/5mC/5hmC likelihood estimatorUsage
scoreOxBS(theta, betaBS, betaOxBS, signalBS, signalOxBS)
Arguments
theta
2-element parameter vector
betaBS
beta value from conventional bisulfite conversion
betaOxBS
beta value from oxy-bisulfite conversion
signalBS
total signal from conventional bisulfite conversion
signalOxBS
total signal from oxy-bisulfite conversion
Value
score vector for C/5mC/5hmC likelihood
Details
Score function for C/5mC/5hmC likelihood estimator;
used for maximum likelihood estimation, not typically called by user.