JaccardSM

Calculates the Jaccard similarity matrix.

Implements partition-assisted clustering and multiple alignments of networks. It 1) utilizes partition-assisted clustering to find robust and accurate clusters and 2) discovers coherent relationships of clusters across multiple samples. It is particularly useful for analyzing single-cell data set. Please see Li et al. (2017) <doi:10.1371/journal.pcbi.1005875> for detail method description.

Ye Li

Partition-Assisted Clustering and Multiple Alignments of
Networks

Dangna Li

JaccardSM function

<dl><dt>network1</dt>
<dd>first network matrix input</dd>
<dt>network2</dt>
<dd>second network matrix input</dd></dl>

Arguments

Calculates the Jaccard similarity matrix. — JaccardSM

<dl>

<dt>network1</dt>
<dd>first network matrix input</dd>


<dt>network2</dt>
<dd>second network matrix input</dd>

</dl>

JaccardSM: Calculates the Jaccard similarity matrix.

Description

Usage

Value

Arguments