annotationMatrix_withSubpopProp

Adds subpopulation proportion for the annotation matrix for the clades

Implements partition-assisted clustering and multiple alignments of networks. It 1) utilizes partition-assisted clustering to find robust and accurate clusters and 2) discovers coherent relationships of clusters across multiple samples. It is particularly useful for analyzing single-cell data set. Please see Li et al. (2017) <doi:10.1371/journal.pcbi.1005875> for detail method description.

Ye Li

Partition-Assisted Clustering and Multiple Alignments of
Networks

Dangna Li

annotationMatrix_withSubpopProp function

<dl><dt>aggregateMatrix_withAnnotation</dt>
<dd>the annotated clade matrix</dd></dl>

Arguments

Adds subpopulation proportion for the annotation matrix for the clades — annotationMatrix_withSubpopProp

<dl>

<dt>aggregateMatrix_withAnnotation</dt>
<dd>the annotated clade matrix</dd>

</dl>

annotationMatrix_withSubpopProp: Adds subpopulation proportion for the annotation matrix for the clades

Description

Usage

Value

Arguments