heatmapInput

Creates the matrix that can be easily plotted with a heatmap function available in an R package

Implements partition-assisted clustering and multiple alignments of networks. It 1) utilizes partition-assisted clustering to find robust and accurate clusters and 2) discovers coherent relationships of clusters across multiple samples. It is particularly useful for analyzing single-cell data set. Please see Li et al. (2017) <doi:10.1371/journal.pcbi.1005875> for detail method description.

Ye Li

Partition-Assisted Clustering and Multiple Alignments of
Networks

Dangna Li

heatmapInput function

<dl><dt>aggregateMatrix_withAnnotation</dt>
<dd>the annotated clade matrix</dd></dl>

Arguments

Creates the matrix that can be easily plotted with a heatmap function available in an R package — heatmapInput

<dl>

<dt>aggregateMatrix_withAnnotation</dt>
<dd>the annotated clade matrix</dd>

</dl>

heatmapInput: Creates the matrix that can be easily plotted with a heatmap function available in an R package

Description

Usage

Value

Arguments