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PAnnBuilder (version 1.36.0)

Protein annotation data package builder

Description

Processing annotation data from public data repositories and building protein-centric annotation data packages.

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Version

Version

1.36.0

License

LGPL (>= 2.0)

Maintainer

Li Hong

Last Published

February 15th, 2017

Functions in PAnnBuilder (1.36.0)

scopBuilder_DB

Build Data Package for Structural Classification of Proteins
GOABuilder_DB

Build Data Packages for Proteomics Gene Ontology
HomoloGeneBuilder_DB

Build Data Packages for Homolog Protein Group
ptmBuilder_DB

Build Data Packages for Protein Post-Translational Modifications
makeLLDB

Create a Lazy Loading Database for Package Data Files
bfBuilder_DB

Build Data Packages for Body Fluid Proteomes
subcellBuilder_DB

Build Data Package for Protein Subcellular Location
processData

Convert Data Format
writeData_DB

Parse and Write Data into R Data Packages
crossBuilder_DB

Build Data Packages for Protein ID Mapping
writeManPage

Write Help Documents
getSrcUrl

Get the Url and Release information for Diverse Databases
InParanoidBuilder_DB

Build Data Packages for Ortholog Protein Group
dNameBuilder_DB

Build Data Packages for Mapping between ID and Name
pBase

Define Class and Object
.onLoad

Load packages and data
createAnnObjs

Creates the AnnObj instances
pSeqBuilder_DB

Build Data Packages for Query Sequences
pBaseBuilder_DB

Build Data Packages for Primary Protein Database
PeptideAtlasBuilder_DB

Build data package for experimentally identified peptides
intBuilder_DB

Build Data Package for Interaction
loadFromUrl

Load Files from a Web Site