pBase: Define Class and Object
Description
This function define class and create new object.
Usage
pBase(srcUrl, parser, built="", fromWeb=TRUE, organism)
Arguments
srcUrl
a character string for the url where data file will be
retained.
parser
a character string for the path of the parser file.
built
a character string for the release/version information of
source data.
fromWeb
a boolean to indicate whether the source
data will be downloaded from the web or read from a local file
organism
a character string for the name of the organism of
concern. (eg: "Homo sapiens")
Value
pBase return a object of "pBase" class.
Details
Bioconductor "AnnBuilder" package define a class "pubRepo". Here we
define a subclass of "pubRepo" called "pBase". "pBase" is used to process
data from SwissProt, TREMBL, IPI, NCBI RefSeq databases.