PBSadmb (version 1.1.4)

linkAD: Link Object Files to Make an Executable

Description

Links the binary object file 'prefix'.o to the ADMB libraries and produces the executable file 'prefix'.exe.

Usage

linkAD(prefix, raneff=FALSE, safe=TRUE, dll=FALSE, debug=FALSE, 
   logfile=TRUE, add=TRUE, verbose=TRUE, pathfile=NULL)

Value

Invisibly returns the shell call and its messages.

Arguments

prefix

string name prefix of the ADMB project (e.g., "vonb").

raneff

logical: use the random effects model, otherwise use the normal model.

safe

logical: if TRUE, use safe mode with bounds checking on all array objects, otherwise use optimized mode for fastest execution.

dll

create dll (rather than executable)

debug

compile with debug symbols

logfile

logical: if TRUE, create a log file of the messages from the shell call.

add

logical: if TRUE, append shell call messages to an exsiting log file.

verbose

logical: if TRUE, report the shell call an its messages to the R console.

pathfile

string name of 2-column text file that details the relevant paths for the R variables admbpath, gccpath, and editor.

Author

Jon T. Schnute, Scientist Emeritus
Pacific Biological Station (PBS), Fisheries & Oceans Canada (DFO), Nanaimo BC
Last modified Rd: 2015-01-27

Details

This function uses the C++ comiler declared in .PBSadmb. If logfile=TRUE, any errors will appear in 'prefix'.log. If verbose=TRUE, they will appear in the R console.

See Also

convAD, compAD, makeAD, readADpaths