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PBSadmb (version 1.1.4)

ADMB for R Using Scripts or GUI

Description

A collection of software provides R support for 'ADMB' (Automatic Differentiation Model Builder) and a 'GUI' interface facilitates the conversion of 'ADMB' template code to 'C code' followed by compilation to a binary executable. Stand-alone functions can also be run by users not interested in clicking a 'GUI'.

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Version

Install

install.packages('PBSadmb')

Monthly Downloads

657

Version

1.1.4

License

GPL (>= 2)

Issues

5

Pull Requests

0

Stars

1

Forks

0

Maintainer

Rowan Haigh

Last Published

March 19th, 2019

Functions in PBSadmb (1.1.4)

cleanAD

Clean ADMB-Generated Files from the Working Directory
runAD

Run an Executable Binary File
convOS

Convert Text Files to Default OS Format
runMC

Run an Executable Binary File in MCMC Mode
readADpaths

Read ADMB Paths From a Text File
readRep

Read an ADMB Report into R Memory
suggestPath

Suggest a Path to a Specified Program
convAD

Convert TPL Code to CPP Code
writeADopts

Writes the ADMB Options List from Memory to a File
atget

Get/Print Objects From or Put Objects Into Temporary Work Environment
startLog

Start a Log File
copyFiles

Copy System Files
linkAD

Link Object Files to Make an Executable
makeAD

Make an Executable Binary File from a C File
showADargs

Show All Arguments for an ADMB Executable
setADpath

Create ADMB Options List
setupAD

Set Up Paths for PBSadmb
editAD

Edit ADMB Files
editADfile

Edit an ADMB File
compAD

Compile C Code
appendLog

Append Data to Log File
checkADopts

Check ADMB Options for Path Integrity
PBSadmb

PBS ADMB Package
admb

Start the PBSadmb GUI for ADMB
plotMC

Plot Results of MCMC Simulation
readADopts

Read an ADMB Options List into Memory From a File