power_example

A subset of power results with multiple
replicates number from PoweREST

datasets

Power estimation and sample size calculation for 10X Visium Spatial Transcriptomics data to detect differential expressed genes between two conditions based on bootstrap resampling. See Shui et al. (2025) <doi:10.1371/journal.pcbi.1013293> for method details.

Lan Shui

PoweREST

A Bootstrap-Based Power Estimation Tool for Spatial
Transcriptomics

power_example function

<div class="section" id="power-example">
<h3><code>power_example</code></h3>
A data frame with 844 rows and 5 columns:<dl>
<dt>avg_logFC</dt>
<dd>average log2FC</dd><dt>mean_PCT</dt>
<dd>percentage of spots detecting the gene</dd><dt>sample_size</dt>
<dd>number of replicates</dd><dt>power</dt>
<dd>power values</dd><dt>avg_log2FC_abs</dt>
<dd>the absolute value of average log2FC</dd>
</dl></div>

Format

An example of power results with multiple replicates number — power_example

<div class='section' id='power-example'>
<h3><code>power_example</code></h3>


A data frame with 844 rows and 5 columns:<dl>
<dt>avg_logFC</dt>
<dd>average log2FC</dd>

<dt>mean_PCT</dt>
<dd>percentage of spots detecting the gene</dd>

<dt>sample_size</dt>
<dd>number of replicates</dd>

<dt>power</dt>
<dd>power values</dd>

<dt>avg_log2FC_abs</dt>
<dd>the absolute value of average log2FC</dd>


</dl>

</div>

power_example: An example of power results with multiple replicates number

Description

Usage

Arguments

Format

`power_example`