ProCoNA (version 1.10.0)

MMvsPS: Module members vs Peptide Significance

Description

Plots the module membership (correlation to eigenvector) against the peptide significance (correlation to phenotype) for a given trait and module

Usage

MMvsPS(pnet, pepdat, phenoVec, mod)

Arguments

pnet

The procona network

pepdat

the peptide data, with rows as samples and columns as peptides

phenoVec

the phenotypic trait, vector

mod

the module of interest

Value

Examples

data(ProCoNA_Data)
#net1 <- buildProconaNetwork("peptide network", peptideData, pow=13)
MMvsPS(net1, peptideData, phenotypes[,5], 1)