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ProCoNA (version 1.8.0)

Protein co-expression network analysis (ProCoNA).

Description

Protein co-expression network construction using peptide level data, with statisical analysis. (Journal of Clinical Bioinformatics 2013, 3:11 doi:10.1186/2043-9113-3-11)

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Version

1.8.0

License

GPL (>= 2)

Maintainer

David L Gibbs

Last Published

February 15th, 2017

Functions in ProCoNA (1.8.0)

compareNetworksWithFishersExactTestProcona

compareNetworksWithFishersExactTest

bootstrapProconaNetwork

Accessors

Accessors for the proconaNet S4 class

correlationWithPhenotypesHeatMap

modulePhenotypeCorrelations

peptideConnectivityTest

moduleMemberCorrelations

i2c

MMvsPS

Module members vs Peptide Significance

Procona Software Version

toPermTest

proconaNet-class

proconaNet S4 class

peptideCorrelationTest

plotNet

procona-package

Peptide co-expression network construction.

ProCoNA-Data

A simulated mass tag data base