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R2BayesX (version 1.0-0)

Estimate Structured Additive Regression Models with BayesX

Description

An R interface to estimate structured additive regression (STAR) models with BayesX.

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Version

Install

install.packages('R2BayesX')

Monthly Downloads

2,159

Version

1.0-0

License

GPL-2 | GPL-3

Maintainer

Nikolaus Umlauf

Last Published

January 26th, 2015

Functions in R2BayesX (1.0-0)

ForestHealth

Forest Health Data
GAMart

GAM Artificial Data Set
delete.neighbor

Delete Neighborhood Relations
BeechBnd

Beech Location Map
Interface between nb and gra format

Convert nb and gra format into each other
plotmap

Plot Maps
GCV

Gerneralized Cross Validation Criterion
summary.bayesx

Bayesx Summary Statistics
bayesx_logfile

BayesX Log-Files
bayesx

Estimate STAR Models with BayesX
write.bayesx.input

Write the BayesX Program
fitted.bayesx

Extract BayesX Fitted Values and Residuals
ZambiaBnd

Zambia Map
BeechGra

Beech Neighborhood Information
plotblock

Factor Variable and Random Effects Plots
MunichBnd

Munich Map
GRstats

Compute Gelman and Rubin's convergence diagnostics from multicore BayesX models.
bayesx.term.options

Show BayesX Term Options
colorlegend

Plot a Color Legend
DIC

Deviance Information Criterion
bayesx.control

Control Parameters for BayesX
cprob

Extract Contour Probabilities
samples

Extract Samples of Coefficients and Variances
bayesx_prgfile

BayesX Program-Files
add.neighbor

Add Neighborhood Relations
predict.bayesx

Prediction from fitted BayesX objects
write.gra

Saving Maps in Graph Format
FantasyBnd

Fantasy Map
bayesx.construct

Construct BayesX Model Term Objects
R2BayesX-package

Estimate STAR Models with BayesX
bnd2gra

Convert Boundary Format to Graph Format
plot.bayesx

Default BayesX Plotting
write.bnd

Saving Maps in Boundary Format
GermanyBnd

Germany Map
term.freqs

Extract model term selection frequencies.
parse.bayesx.input

Parse BayesX Input
plotsamples

Plot Sampling Path(s) of Coefficient(s) and Variance(s)
plot3d

3D Effect Plot
read.bnd

Read Geographical Information in Boundary Format
read.gra

Read Geographical Information in Graph Format
bayesx_runtime

BayesX Program-Runtimes
sx

Construct BayesX Model Terms in A Formula
Interface between sp and bnd format

Convert sp and bnd format into each other
sliceplot

Plot Slices of Bivariate Functions
getscript

Generate an executable R fitted model script
plot2d

2D Effect Plot
get.neighbor

Obtain Neighbors of Given Regions
shp2bnd

convert a shape-file into a boundary object
ZambiaNutrition

Determinants of Childhood Malnutrition in Zambia
read.bayesx.output

Read BayesX Output from Directories