Read in the output from ADMB likelihood profiling stored
in a .plt file
Usage
read_plt(varname)
Arguments
varname
(character) Name of profiled variable
(base name of .plot file)
Value
List containing the following elements:
proflikelihood profile: a two-column matrix
containing the parameter value and the corresponding
likelihood (not the log-likelihood or negative
log-likelihood), scaled to integrate to 1.0
cimatrix of upper and lower confidence intervals
at the 0.9, 0.95, and 0.975 levels
prof_normlikelihood profile, based on a normal
approximation
cinormconfidence interval matrix,
based on normal approximation