Usage
run.control(check_tpl = TRUE, write_files = TRUE, checkparam = c("stop", "warn", "write", "ignore"), checkdata = c("stop", "warn", "write", "ignore"), compile = TRUE, run = TRUE, read_files = TRUE, clean_files = "all")
Arguments
check_tpl
Check the specified TPL file for problems?
write_files
Write out data and initialization files?
checkparam
How to check PARAMETERS section of the TPL file:
stop=stop if there are problems; warn=give a warning if there
are problems, but try to proceed; write=modify TPL file, writing
appropriate sections; ignore=assume TPL file is OK, proceed
checkdata
as with checkparam: how/whether to check/generate the
DATA section of the TPL file
compile
compile the TPL file (via ADMB) into an executable?
run
run the executable file with the specified data/initial values?
read_files
read the results of an ADMB run into R?
clean_files
Delete working files after completion of the run? Options
are "all", "sys", "output", "none"; TRUE
is equivalent to "all" and FALSE is equivalent to "none"