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RBGL (version 1.42.0)

An interface to the BOOST graph library

Description

A fairly extensive and comprehensive interface to the graph algorithms contained in the BOOST library.

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Version

Monthly Downloads

4

Version

1.42.0

License

Artistic-2.0

Maintainer

Bioconductor Package Maintainer

Last Published

February 15th, 2017

Functions in RBGL (1.42.0)

brandes.betweenness.centrality

Compute betweenness centrality for an undirected graph
clusteringCoef

Calculate clustering coefficient for an undirected graph
bellman.ford.sp

Bellman-Ford shortest paths using boost C++
astarSearch

Compute astarSearch for a graph
bandwidth

Compute bandwidth for an undirected graph
bfs

Breadth and Depth-first search
chrobakPayneStraightLineDrawing

chrobakPayneStraightLineDrawing
boyerMyrvoldPlanarityTest

boyerMyrvoldPlanarityTest
biConnComp

Compute biconnected components for a graph
betweenness.centrality.clustering

Graph clustering based on edge betweenness centrality
dag.sp

DAG shortest paths using boost C++
edmondsMaxCardinalityMatching

edmondsMaxCardinalityMatching
dominatorTree

Compute dominator tree from a vertex in a directed graph
edgeConnectivity

computed edge connectivity and min disconnecting set for an undirected graph
RBGL-defunct

Defunct Functions in Package RBGL
connectedComp

Identify Connected Components in an Undirected Graph
dijkstra.sp

Dijkstra's shortest paths using boost C++
sequential.vertex.coloring

Compute a vertex coloring for a graph
clusteringCoefAppr

Approximate clustering coefficient for an undirected graph
edmondsOptimumBranching

edmondsOptimumBranching
incremental.components

Compute connected components for an undirected graph
is.triangulated

Decide if a graph is triangulated
graphGenerator

Generate an undirected graph with adjustable clustering coefficient
isKuratowskiSubgraph

isKuratowskiSubgraph
highlyConnSG

Compute highly connected subgraphs for an undirected graph
floyd.warshall.all.pairs.sp

compute shortest paths for all pairs of nodes
isomorphism

Compute isomorphism from vertices in one graph to those in another graph
gprofile

Compute profile for a graph
FileDep

FileDep: a graphNEL object representing a file dependency dataset example in boost graph library
extractPath

convert a dijkstra.sp predecessor structure into the path joining two nodes
lambdaSets

Find all the lambda-sets in an undirected graph
layout

Layout an undirected graph in 2D -- suspended june 16 2012
Ordering

Compute vertex ordering for an undirected graph
planarCanonicalOrdering

planarCanonicalOrdering
separates

A function to test whether a subset of nodes separates two other subsets of nodes.
removeSelfLoops

remove self loops in a graph
maximumCycleRatio

maximumCycleRatio
max.flow

Compute max flow for a directed graph
wavefront

Compute the i-th/max/average/rms wavefront for a graph
isStraightLineDrawing

isStraightLineDrawing
minCut

Compute min-cut for an undirected graph
johnson.all.pairs.sp

compute shortest path distance matrix for all pairs of nodes
sloanStartEndVertices

sloanStartEndVertices
minimumCycleRatio

minimumCycleRatio
makeMaximalPlanar

makeMaximalPlanar
maxClique

Find all the cliques in a graph
sp.between

Dijkstra's shortest paths using boost C++
makeBiconnectedPlanar

makeBiconnectedPlanar
transitivity

Calculate transitivity for an undirected graph
tsort

topological sort of vertices of a digraph
makeConnected

makeConnected
mstree.kruskal

Kruskal's minimum spanning tree in boost
mstree.prim

Compute minimum spanning tree for an undirected graph
kCliques

Find all the k-cliques in an undirected graph
kCores

Find all the k-cores in a graph
planarFaceTraversal

planarFaceTraversal
RBGL.overview

RBGL.overview
strongComp

Identify Strongly Connected Components
transitive.closure

Compute transitive closure of a directed graph