Learn R Programming

RBGL (version 1.48.1)

An interface to the BOOST graph library

Description

A fairly extensive and comprehensive interface to the graph algorithms contained in the BOOST library.

Copy Link

Version

Monthly Downloads

81

Version

1.48.1

License

Artistic-2.0

Maintainer

Bioconductor Package Maintainer

Last Published

February 15th, 2017

Functions in RBGL (1.48.1)

astarSearch

Compute astarSearch for a graph
dijkstra.sp

Dijkstra's shortest paths using boost C++
isStraightLineDrawing

isStraightLineDrawing
betweenness.centrality.clustering

Graph clustering based on edge betweenness centrality
johnson.all.pairs.sp

compute shortest path distance matrix for all pairs of nodes
mstree.prim

Compute minimum spanning tree for an undirected graph
strongComp

Identify Strongly Connected Components
extractPath

convert a dijkstra.sp predecessor structure into the path joining two nodes
RBGL.overview

RBGL.overview
makeBiconnectedPlanar

makeBiconnectedPlanar
sequential.vertex.coloring

Compute a vertex coloring for a graph
clusteringCoefAppr

Approximate clustering coefficient for an undirected graph
bandwidth

Compute bandwidth for an undirected graph
connectedComp

Identify Connected Components in an Undirected Graph
boyerMyrvoldPlanarityTest

boyerMyrvoldPlanarityTest
is.triangulated

Decide if a graph is triangulated
planarFaceTraversal

planarFaceTraversal
graphGenerator

Generate an undirected graph with adjustable clustering coefficient
Ordering

Compute vertex ordering for an undirected graph
max.flow

Compute max flow for a directed graph
planarCanonicalOrdering

planarCanonicalOrdering
isKuratowskiSubgraph

isKuratowskiSubgraph
removeSelfLoops

remove self loops in a graph
makeMaximalPlanar

makeMaximalPlanar
maxClique

Find all the cliques in a graph
minimumCycleRatio

minimumCycleRatio
RBGL-defunct

Defunct Functions in Package RBGL
biConnComp

Compute biconnected components for a graph
mstree.kruskal

Kruskal's minimum spanning tree in boost
sp.between

Dijkstra's shortest paths using boost C++
bfs

Breadth and Depth-first search
edgeConnectivity

computed edge connectivity and min disconnecting set for an undirected graph
isomorphism

Compute isomorphism from vertices in one graph to those in another graph
kCores

Find all the k-cores in a graph
lambdaSets

Find all the lambda-sets in an undirected graph
transitivity

Calculate transitivity for an undirected graph
layout

Layout an undirected graph in 2D -- suspended june 16 2012
tsort

topological sort of vertices of a digraph
transitive.closure

Compute transitive closure of a directed graph
edmondsMaxCardinalityMatching

edmondsMaxCardinalityMatching
dag.sp

DAG shortest paths using boost C++
gprofile

Compute profile for a graph
incremental.components

Compute connected components for an undirected graph
wavefront

Compute the i-th/max/average/rms wavefront for a graph
maximumCycleRatio

maximumCycleRatio
FileDep

FileDep: a graphNEL object representing a file dependency dataset example in boost graph library
bellman.ford.sp

Bellman-Ford shortest paths using boost C++
chrobakPayneStraightLineDrawing

chrobakPayneStraightLineDrawing
edmondsOptimumBranching

edmondsOptimumBranching
highlyConnSG

Compute highly connected subgraphs for an undirected graph
floyd.warshall.all.pairs.sp

compute shortest paths for all pairs of nodes
sloanStartEndVertices

sloanStartEndVertices
separates

A function to test whether a subset of nodes separates two other subsets of nodes.
brandes.betweenness.centrality

Compute betweenness centrality for an undirected graph
dominatorTree

Compute dominator tree from a vertex in a directed graph
kCliques

Find all the k-cliques in an undirected graph
makeConnected

makeConnected
minCut

Compute min-cut for an undirected graph
clusteringCoef

Calculate clustering coefficient for an undirected graph