oligoType


Inherits: <a rd-options="" href="/link/rdmlBaseType?package=RDML&version=0.9-1" data-mini-rdoc="RDML::rdmlBaseType">rdmlBaseType</a>.


datasets

Imports real-time thermo cycler (qPCR) data from Real-time PCR
Data Markup Language (RDML) format files and transforms to the appropriate
formats of the 'qpcR' and 'chipPCR' packages. Contains a dendrogram
visualization for the structure of RDML object.

Konstantin A Blagodatskikh

RDML

Importing Real-Time Thermo Cycler (qPCR) Data from RDML Format
Files

oligoType function

An <code><a rd-options="" href="/link/R6Class?package=RDML&version=0.9-1" data-mini-rdoc="RDML::R6Class">R6Class</a></code> generator object.

Format

<code>oligoType$new(threePrimeTag = NULL,
  fivePrimeTag = NULL, sequence)</code>

Initialization

<dl>
  <dt><code>threePrimeTag</code></dt><dd><a rd-options="assertthat" href="/link/is.string?package=RDML&version=0.9-1&to=assertthat" data-mini-rdoc="assertthat::is.string">is.string</a>. Description of
  three prime modification (if present). </dd> <dt><code>fivePrimeTag</code></dt><dd><a rd-options="assertthat" href="/link/is.string?package=RDML&version=0.9-1&to=assertthat" data-mini-rdoc="assertthat::is.string">is.string</a>. Description of
  five prime modification (if present).</dd> <dt><code>sequence</code></dt><dd><a rd-options="assertthat" href="/link/is.string?package=RDML&version=0.9-1&to=assertthat" data-mini-rdoc="assertthat::is.string">is.string</a>.</dd> </dl> 

oligoType: oligoType R6 class.

Description

Usage

Arguments

Format

Initialization

Fields