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RGalaxy (version 1.12.0)

Make an R function available in the Galaxy web platform

Description

Given an R function and its manual page, make the documented function available in Galaxy.

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Version

Version

1.12.0

License

Artistic-2.0

Maintainer

Bioconductor Package Maintainer

Last Published

February 15th, 2017

Functions in RGalaxy (1.12.0)

galaxy

Make a function available in Galaxy
foo

a foo function
RserveConnection-class

Class "RserveConnection"
getFriendlyName

Change a camelCase name to a friendlier version
testFunctionWithGalaxySelectParam

A variation on functionToGalaxify that takes a multiple-choice option using the GalaxySelectParam class.
runFunctionalTest

Run the functional test associated with a function.
gmessage

Sends informational, warning, and error messages to the user.
probeLookup

Get the PFAM and SYMBOL names for a set of Affymetrix probe IDs
testFunctionWithSelect

A variation on functionToGalaxify that takes a multiple-choice option.
functionToGalaxify

Add two matrices
GalaxyInputFile-class

Class "GalaxyInputFile"
GalaxyConfig-class

Class "GalaxyConfig"
GalaxyOutput-class

Class "GalaxyOutput"
addTwoNumbers

Add two numbers
anotherTestFunction

Add two matrices
addTwoNumbersWithTest

Add two numbers (with functional test)
GalaxyClasses

Galaxy Parameter Classes