netmhcpan_list_alleles

the list of alleles in the acceptable format for netMHCpan

datasets

Tool for the analysis Mass Spectrometry (MS) data in the context of
immunopeptidomic analysis for the identification of hybrid
peptides and the predictions of binding affinity of all peptides
using 'netMHCpan' <doi:10.1093/nar/gkaa379> while providing a summary
of the netMHCpan output. 'RHybridFinder' (RHF) is destined for
researchers who are looking to analyze their MS data for the purpose
of identification of potential spliced peptides. This package,
developed mainly in base R, is based on the workflow published by
Faridi et al. in 2018 <doi:10.1126/sciimmunol.aar3947>.

Frederic Saab

RHybridFinder

Identification of Hybrid Peptides in Immunopeptidomic Analyses

Peter Kubiniok

netmhcpan_list_alleles function

A data frame with 1024 rows and 1 variables:<dl class="dl-horizontal">
 <dt><code>V1</code></dt><dd>character the alleles</dd>
</dl>

Format

netmhcpan_list_alleles — netmhcpan_list_alleles

A data frame with 1024 rows and 1 variables:<dl class='dl-horizontal'>
 <dt><code>V1</code></dt><dd>character the alleles</dd>
</dl>

netmhcpan_list_alleles: netmhcpan_list_alleles

Description

Usage

Arguments

Format

Details