processProblematicPeaks

mode

Base name of the archive to write to (for "abc" the exported failpeaks list will be "abc_Failpeaks.csv").
if the compoundlist is complete, "tentative", if at least a formula is present or "unknown"
if the only know thing is the m/z

archivename


Generates a list of intense unmatched peaks for further review (the "failpeak list") and exports it if the archive name is given.


Workflow to process tandem MS files and build MassBank records.
Functions include automated extraction of tandem MS spectra, formula
assignment to tandem MS fragments, recalibration of tandem MS spectra with
assigned fragments, spectrum cleanup, automated retrieval of compound
information from Internet databases, and export to MassBank records.

RMassBank at Eawag

RMassBank

Workflow to process tandem MS files and build MassBank records

processProblematicPeaks function

Base name of the archive to write to (for "abc" the exported failpeaks list will be "abc_Failpeaks.csv").
if the compoundlist is complete, "tentative", if at least a formula is present or "unknown"
if the only know thing is the m/z

Generates a list of intense unmatched peaks for further review (the "failpeak list") and exports it if the archive name is given.

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processProblematicPeaks: Generate list of problematic peaks

Description

Usage

Arguments

Value