updateSettings

settings

Whether to update parameters quietly (<code>FALSE</code>) or to notify the user
    of the changed parameters (<code>TRUE</code>, default.) This serves to make the user aware that
standard parameters are filled in!

warn


Checks if all necessary fields are present in the current settings
and fills in default values from the <code><a rd-options="" href="/link/RmbDefaultSettings?package=RMassBank&version=2.0.0" data-mini-rdoc="RMassBank::RmbDefaultSettings">RmbDefaultSettings</a></code>
if required.


Workflow to process tandem MS files and build MassBank records.
Functions include automated extraction of tandem MS spectra, formula
assignment to tandem MS fragments, recalibration of tandem MS spectra with
assigned fragments, spectrum cleanup, automated retrieval of compound
information from Internet databases, and export to MassBank records.

RMassBank at Eawag

RMassBank

Workflow to process tandem MS files and build MassBank records

updateSettings function

Whether to update parameters quietly (<code>FALSE</code>) or to notify the user
    of the changed parameters (<code>TRUE</code>, default.) This serves to make the user aware that
standard parameters are filled in!

Checks if all necessary fields are present in the current settings
and fills in default values from the <code><a href="RmbDefaultSettings" rd-options="">RmbDefaultSettings</a></code>
if required.

updateSettings: Update settings to current version

Description

Usage

Arguments

Value

Examples