normalizeMainEffectTemplate


  An object of class <code><a rd-options="" href="/link/RNAinteract?package=RNAinteract&version=1.20.0" data-mini-rdoc="RNAinteract::RNAinteract">RNAinteract</a></code>.



The name of the screen in which the normalization should be applied. If <code>screen = NULL</code>, the normalization is applied on all screens.


screen


The name of the channel in which the normalization should be applied. If <code>channel = NULL</code>, the normalization is applied on all channels.


channel


Normalize for a spatial main effect of the template genes.


 manip 

RNAinteract estimates genetic interactions from
multi-dimensional read-outs like features extracted from
images. The screen is assumed to be performed in multi-well
plates or similar designs. Starting from a list of features
(e.g. cell number, area, fluorescence intensity) per well,
genetic interactions are estimated. The packages provides
functions for reporting interacting gene pairs, plotting
heatmaps and double RNAi plots. An HTML report can be written
for quality control and analysis.

Bernd Fischer

RNAinteract

Estimate Pairwise Interactions from multidimensional features

normalizeMainEffectTemplate function

An object of class <code><a href="RNAinteract" rd-options="">RNAinteract</a></code>.

The name of the screen in which the normalization should be applied. If <code>screen = NULL</code>, the normalization is applied on all screens.

The name of the channel in which the normalization should be applied. If <code>channel = NULL</code>, the normalization is applied on all channels.

Normalize for a spatial main effect of the template genes.

normalizeMainEffectTemplate: normalize template main effect

Description

Usage

Arguments

Value

Details

See Also

Examples