
Sample object of class <code><a rd-options="" href="/link/RNAinteract?package=RNAinteract&version=1.20.0" data-mini-rdoc="RNAinteract::RNAinteract">RNAinteract</a></code>. The data are real but anonymized. The object contains two replicate screens with three readout channels.


datasets

RNAinteract estimates genetic interactions from
multi-dimensional read-outs like features extracted from
images. The screen is assumed to be performed in multi-well
plates or similar designs. Starting from a list of features
(e.g. cell number, area, fluorescence intensity) per well,
genetic interactions are estimated. The packages provides
functions for reporting interacting gene pairs, plotting
heatmaps and double RNAi plots. An HTML report can be written
for quality control and analysis.

Bernd Fischer

RNAinteract

Estimate Pairwise Interactions from multidimensional features

sgi function

The data contains two screens with three readout channels. The screen is performed on multiwell plates with 8 x 12 wells.

Format

Sample object of class <code><a href="RNAinteract" rd-options="">RNAinteract</a></code>. The data are real but anonymized. The object contains two replicate screens with three readout channels.

sgi: Dataset of class 'RNAinteract'

Description

Usage

Arguments

Format

Examples