RPPanalyzer (version 1.4.9)

dataII: Reverse phase protein array data, samples from a stimulation time course

Description

The data Set is a list of four elements. Sample.median and sample.mads are matrices containing logged signal intensities and errors, the data frames arraydescription and sampledescription comprising feature and phenodata.

Usage

data(dataII)

Format

List

Details

The data set is a list of four elements with data of a original reverse phase array experiment. The elements Sample.median and sample.mads are 624 times 12 matrices containing logged signal intensities and errors for every sample of the experiment. The values are background corrected and normalized against total protein content. Arraydescription is a data frame, describing the incubation of every array refering the column of the matrices. Required rows are target and AB_ID with characters and array.id (four integers linked with "-"). Sampledescription is a data frame according to the rows of the matrices annotating the samples. The columns "sample", "stimulation", "inhibition", "stim_concentration", and "time" are describing the time course experiment.

Examples

# \donttest{
data(dataII)
str(dataII)
# }