loopLength

Used by RNAPlot to get the length of a loop

 RNA 

 stems 

Functions for creating and manipulating RNA secondary structure plots.

Jonathan Price

RRNA

Secondary Structure Plotting for RNA

JP Bida

loopLength function

<dl> <dt>input</dt>
<dd>CT file 
<code>makeCt("((((...))))","AAAACCCUUUU")</code></dd> <dt>start</dt>
<dd>Position of the first nucleotide in the the loop</dd></dl>

Arguments

Author

internal function that determines the length of a loop — loopLength

<dl>

 <dt>input</dt>
<dd>CT file 
<code>makeCt("((((...))))","AAAACCCUUUU")</code></dd>

 <dt>start</dt>
<dd>Position of the first nucleotide in the the loop</dd>

</dl>

loopLength: internal function that determines the length of a loop

Description

Usage

Value

Arguments

Author

Examples