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RSPS (version 1.0)

RNA-Seq Power Simulation

Description

Provides functions for estimating power or sample size for RNA-Seq studies. Empirical approach is used and the data is assumed to be count in nature. The underlying distribution of data is assumed to be Poisson or negative binomial. The package contains 6 function; 4 functions provide estimates of sample size or power for Poisson and Negative Binomial distribution; 2 functions provide plots of power for given sample size or sample size for given power.

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Version

Install

install.packages('RSPS')

Monthly Downloads

7

Version

1.0

License

GPL-2

Maintainer

Milan Bimali

Last Published

May 29th, 2015

Functions in RSPS (1.0)

power.plot

Provides plot of Estimated Power vs Sample Size
negbin.samp

Estimates sample sizes for desired power using simulation from Negative Binomial distribution
negbin.pow

Estimates power for given sample size using simulation from Negative Binomial distribution
poiss.pow

Estimates power for given sample size using simulation from Poisson distribution
poiss.samp

Estimates sample sizes for desired power using simulation from Poisson distribution
RSPS-package

Provides estimates of power or sample size using empirical approach.
sample.plot

Provides plot of Estimated sample size vs power