RVtests (version 1.0)

sample.cgeno: Genotype counts dataset

Description

A list of genotype counts, phenotype, and polyphen weight

Usage

data(sample.cgeno)

format

List of 3 cgeno: data.frame with 960 observations of 3 variables, indid (individual ID), snpid (SNP ID), and count. phen: data.frame with 262 observations of 2 variables, indid (individual ID), and trait. polyphen.weight: data.frame with 71 obs. of 2 variables snpid (SNP ID), and weight.

Details

The dataset was used in comparing VT and WOD methods, see reference below.

References

Ladouceur M, Dastani Z, Aulchenko YS, Greenwood CM, Richards JB (2012) The empirical power of rare variant association methods: Results from sanger sequencing in 1,998 individuals. PloS Genetics 8: e1002496.

Examples

data(sample.cgeno)
str(sample.cgeno)