unmerge_histos: unmerge previously grouped or merged lists of TAD/TAT frequency data

Description

This function unmerges previously grouped or merged lists of TAD/TAT frequency data, and thus allows to add TAD/TAT lists from new tags (see combine_histos).

Usage

unmerge_histos(hist_list)

Value

A list-of-lists of ungrouped/unmerged TAD and TAT frequency data.

$ TAD:List

..$ ID1 : List of 2

.. ..$ bin_breaks: num

.. ..$ df : data.frame

$ TAT:List

..$ ID1 : List of 2

.. ..$ bin_breaks: num

.. ..$ df : data.frame

..$ ID2 : List of 2

...

Arguments

hist_list: A previously grouped or merged list-of-lists to be unmerged (seperated by tags).

Author

Robert K. Bauer

Examples

Run this code

## example 1) read, merge and plot TAD frequency data from several files:
## part I - read histogram data from two files:
hist_dat_1 <- read_histos(system.file("example_files/104659-Histos.csv",package="RchivalTag"))
hist_dat_2 <- read_histos(system.file("example_files/104659b-Histos.csv",package="RchivalTag"))
## note the second list is based on the same data (tag), but on different bin_breaks

## part II - combine TAD/TAT frecuency data from seperate files in one list:
hist_dat_combined <- combine_histos(hist_dat_1, hist_dat_2)
par(mfrow=c(2,1))
hist_tad(hist_dat_combined)
hist_tat(hist_dat_combined)

## part III - force merge TAD/TAT frecuency data from seperate files 
# in one list, by applying common bin_breaks:
hist_dat_merged <- merge_histos(hist_dat_combined,force_merge = TRUE)
hist_tad(hist_dat_merged)
hist_tat(hist_dat_merged)

## part IV - plot merged data:
hist_tad(hist_dat_merged) # of all tags
unique(hist_dat_merged$TAD$merged$df$DeployID) ## list unique tags in merged list
hist_tad(hist_dat_merged, select_id = "15P1019b", select_from = 'DeployID') # of one tag

## part V - unmerge data:
unmerge_histos(hist_dat_merged)