Usage
draw.seq(slice = NULL, start, end, bty = "o", labelCex = 0.75,
bases = c(A = "#44CC44", C = "#4444CC", G = "#FFCC00", T = "#CC4444"),
maxRange = 500, cex.lab = 1, ...)Arguments
slice
Character vector, with a single letter per element.
start
Single integer value, the left boundary of the window, in base pairs.
end
Single integer value, the right boundary of the window, in base pairs.
bty
A character string which determined the type of box which is drawn about plots. If bty is one of "o" (the default), "l", "7", "c", "u", or "]" the resulting box resembles the corresponding upper case letter. A value of "n" suppresses the box. See par.
labelCex
Single numeric value, character expansion factor for labels.
bases
Named character vector, defining the color to use for each nucleotide (names have to be uppercase, slice is converted to uppercase for matching).
maxRange
Single integer value, nothing will be ploted if the plot window is wider by this value (in bases).
cex.lab
The relative character size of x and y axis labels (default: 1). See par.
…
Further arguments to be passed to draw.bg.