RiboProfiling (version 1.2.2)

Ribosome Profiling Data Analysis: from BAM to Data Representation and Interpretation

Description

Starting with a BAM file, this package provides the necessary functions for quality assessment, read start position recalibration, the counting of reads on CDS, 3'UTR, and 5'UTR, plotting of count data: pairs, log fold-change, codon frequency and coverage assessment, principal component analysis on codon coverage.

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Version

1.2.2

License

GPL-3

Maintainer

Last Published

February 25th, 2016

Functions in RiboProfiling (1.2.2)