Ringo (version 1.36.0)

ftr2xys: Convert a NimbleScan ftr-file into a xys-file

Description

Auxiliary function to convert a NimbleScan feature-report file into a xys-file that can be used with the function read.xysfiles of package oligo.

Usage

ftr2xys(ftr.file, path=getwd())

Arguments

ftr.file

character; file path of feature report file to convert into an xys file

path

file path to directory where the xys-file should be written to; defaults to the current working directory

Value

Function returns only NULL invisibly and is only called for its side effect to write the xys-file into the current working directory.

Details

The output file is names as the input ftr file; with the file extension .ftr replaced by .xys.

Examples

 ## Not run: 
#    sapply(list.files(pattern=".ftr$"),ftr2xys)
#    library(oligo)
#    fs = read.xysfiles(list.xysfiles())
#  ## End(Not run)