parsePsimi25Interaction
sourceDb
:"character"
, source databasesourceId
:"character"
, source
database IDinteractionType
:"character"
,
character, the method used for detecting the interaction ,such as
"pull down"expPubMed
:"character"
, PubMed
ID of the publication that describes the experimentsourceId
:"character"
,
source database ID of the experimentconfidenceValue
:"character"
,
confidence value of the experimental interactionparticipant
:"character"
,
UniProt IDs of the participants. Important when no bait/prey
information is availablebait
:"character"
, UniProt ID
of the bait prey
:"character"
, UniProt
ID(s) of the prey(s)inhibitor
:"character"
, UniProt
ID of the inhibitor, NA when missingneutralComponent
:"character"
,
UniProt ID of the neutral components, NA when missingbaitUniProt
:"character"
preyUniProt
:"character"
signature(x = "psimi25Interaction")
:
finds out interaction type signature(object = "psimi25Interaction")
: a print
methodsignature(x = "psimi25Interaction")
: finds
out source databasesignature(x = "psimi25Interaction")
: returns
ID of the source database signature(x = "psimi25Interaction")
: returns the
UniProt ID of the baitsignature(x = "psimi25Interaction")
: returns the
UniProt ID(s) of the prey(s)signature(x = "psimi25Interaction")
:
returns the confidence value of the interactionparsePsimi25Interaction
,S4CLASSpsimi25Interactor-class
,
S4CLASSpsimi25Experiment-class
, S4classpsimi25InteractionEntry-class
showClass("psimi25Interaction")
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