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Rtrack (version 1.0.7)

Spatial Navigation Strategy Analysis

Description

A toolkit for the analysis of paths from spatial tracking experiments (such as the Morris water maze) and calculation of goal-finding strategies. This package is centered on an approach using machine learning for path classification.

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Version

Install

install.packages('Rtrack')

Monthly Downloads

228

Version

1.0.7

License

GPL-3

Issues

2

Pull Requests

1

Stars

6

Forks

2

Maintainer

Rupert Overall

Last Published

October 6th, 2022

Functions in Rtrack (1.0.7)

plot_density

Plot a path density map.
plot_path

Plot a path.
plot_strategies

Plot water maze strategies.
read_path

Read path coordinates from raw data formats.
read_arena

Read an arena description.
subset_experiment

Subset an experiment.
plot_variable

Plot path metrics.
read_experiment

Read experiment data.
threshold_strategies

Subset an rtrack_strategies object.
identify_track_format

Check the format of a track file.
call_mwm_strategy_garthe

Strategy classification using the legacy Garthe classifier.
export_results

Export experiment results to a data.frame or file.
call_strategy

Calculation of search strategies.
check_experiment

Check experiment data.
calculate_metrics

Calculation of spatial search path metrics.
Rtrack

Analysis of spatial tracking data and strategy classification.
export_json

Export experiment data to a JSON file.