Rtrack (version 1.0.7)

call_strategy: Calculation of search strategies.

Description

Calculates Morris water maze strategies from path metrics.

Usage

call_strategy(metrics, version = "mouse_rf_6")

Value

An rtrack_strategies object. The calls element contains the called strategy/strategies as well as confidence scores for all possible strategies.

Arguments

metrics

An rtrack_metrics object from calculate_metrics or a list of such objects.

version

The strategy calling model that should be used. Currently only the default mouse_rf_6 is implemented.

Details

This function implements a classifier based on a trained random forest model.

See Also

threshold_strategies, plot_strategies.

Examples

require(Rtrack)
track_file <- system.file("extdata", "Track_1.csv", package = "Rtrack")
arena_description <- system.file("extdata", "Arena_SW.txt", package = "Rtrack")
arena <- read_arena(arena_description)
path <- read_path(track_file, arena, track.format = "ethovision.3.csv")
metrics <- calculate_metrics(path, arena)
strategies <- call_strategy(metrics)
# Inspect the strategy call
strategies$calls