Invert matrix using Rcpp Armadilo.
Objects exported from other packages
Get RxODE model from object
rxChain Chain or add item to solved system of equations
Checks if the RxODE object was built with the current build
Scaled Inverse Chi Squared distribution
Format rxSolve and related objects as html.
Compile a model if needed
Return the C file associated with the RxODE object
Initial Values and State values for a RxODE object
Current Condition for RxODE object
All model variables for a RxODE object
Get model properties without compiling it.
Use cat when RxODE.verbose is TRUE
Get the rxModels information
Get the normalized model
Check the type of an object using Rcpp
Parse PK function for inclusion in RxODE
Options for RxODE
Parameters specified by the model
Cleanup anonymous DLLs
Return the dimension of the built-in derivatives/inverses
Second command in chaining commands
State variables
Prepare Error function for inclusion in RxODE
This function splits a function based on + or - terms
Recast model in terms of sum/prod
Load RxODE object
Creates an object for caluclating Omega/Omega^-1 and dervatives
Free the C solving information.
Get the number of cores in a system
Prepare Pred function for inclusion in RxODE
Split line into multiple lines at + or - breaks
Unload RxODE object
Add undefined variables to SymPy
Delete the DLL for the model
Left handed Variables
Require namespace, otherwise throw error.
Determine if the DLL associated with the RxODE object is loaded
Choose the type of product to use in RxODE. These are used in the
RxODE prod
blocks
Delete variable if exists.
This translates the parameters specified by the model in the correct type of solving.
Expand if/else clauses into mutiple different types of lines.
Permissive or Strict RxODE sytax options
Takes a model and expands it to log multiplication
Clear memoise cache for RxODE
Setup the initial conditions.
Return the md5 of an RxODE object or file
Simulate Parameters from a Theta/Omega specification
Returns a list of physical drives that have been or currently are
mounted to the computer.
Calculate df/dy derivatives
Use Shiny to help develop an RxODE model
Print x using the message facility
Solves a ODE equation
Choose the type of sums to use for RxODE.
Reload RxODE DLL
Execute sympy statement.
Return a list of reserved functions and variables from sympy
Setup SymPy variables
Setup Pred function based on RxODE object.
Get the theta numbers for the diagonal elements.
Get Omega and Omega^-1 and derivatives
Remove variables created by RxODE from the SymPy environment.
Calculate the sensitivity equations for a model
Fix SymPy expressions to be R parsable expressions
Setup a SymPy environment that sets up the specified RxODE model.
Setup SymPy functions
Setup the initial conditions.
Translate the model to C code if needed
Return the version of SymPy that is running
Does the varaible exist in the SymPy Python environment?
Return the expanded expression (via SymPy)
Creates an object for calculating Omega/Omega^-1 and derivatives
Get Omega^-1 and derivatives
Validate RxODE
Summary of rxDll object
Setup SymPy environment if needed
Sync options with RxODE varaibles
Start SymPy
Execute Python statement without getting the return value.
Setup Windows components for RxODE
Format theta and eta for parameter estimate values in RxODE
Print expanded information about the RxODE object.
Setup Python and SymPy for windows
Converts model specification to/from a SymPy language
Version and repository for this dparser package.
Sample a covariance Matrix from the Posteior Inverse Wishart distribution.
Find the assignments in R expression
Return the RxODE coefficients
Add dosing to eventTable
Check to see if this is an rxSolve object.
Generate an example (template) of a dosing regimen shiny app
Update Solved object with '+'
Create an event table object
Print information about the RxODE object.
Print the rxCoef object
Add sampling to eventTable
Add a return statment to a function.
Assign pointer based on model variables
Creates a logical matrix for block matrixes.
Create an ODE-based model specification
Print the rxCoefSolve object
Print rxDll object
Jacobian and parameter derivatives
Return the DLL associated with the RxODE object