TxSegments

<code>GRangesList</code> of <code>SGFeatures</code> with appropriate
outer elementMetadata columns


Creates an instance of S4 class <code>TxSegments</code> for storing
transcript segments.


internal

RNA-seq data are informative for the analysis of known and
novel transcript isoforms. While the short length of RNA-seq
reads limits the ability to predict and quantify full-length
transcripts, short read data are well suited for the analysis
of individual alternative transcripts events (e.g. inclusion
or skipping of a cassette exon). The SGSeq package enables the
prediction, quantification and visualization of alternative
transcript events from BAM files.

TxSegments: Constructor function for S4 class `TxSegments`

Description

Usage

Arguments

Value