exportFeatures

<code>TxFeatures</code> or <code>SGFeatures</code> object

features

file


Export features to BED format. Splice sites are not included.


RNA-seq data are informative for the analysis of known and
novel transcript isoforms. While the short length of RNA-seq
reads limits the ability to predict and quantify full-length
transcripts, short read data are well suited for the analysis
of individual alternative transcripts events (e.g. inclusion
or skipping of a cassette exon). The SGSeq package enables the
prediction, quantification and visualization of alternative
transcript events from BAM files.

exportFeatures: Export to BED format

Description

Usage

Arguments

Value

Examples