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SMAP (version 1.36.0)

A Segmental Maximum A Posteriori Approach to Array-CGH Copy Number Profiling

Description

Functions and classes for DNA copy number profiling of array-CGH data

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Version

Version

1.36.0

License

GPL-2

Maintainer

Robin Andersson

Last Published

February 15th, 2017

Functions in SMAP (1.36.0)

SMAP-internal

SMAP-internal
SMAPProfile-class

Class "SMAPProfile"
SMAPProfiles-class

Class "SMAPProfiles"
SMAPHMM-class

Class "SMAPHMM": A class to manage HMMs for the SMAP package
SMAPObservations

Constructor for "SMAPObservations" objects
GBM

Glioblastoma multiforme array CGH data
SMAPObservations-class

Class "SMAPObservations": A class to manage microarray observations for the SMAP package
SMAPHMM

Constructor for "SMAPHMM" objects
smap

smap: A Segmental Maximum A Posteriori Approach to Array-CGH Copy Number Profiling