SMAPProfiles-class: Class "SMAPProfiles"
Description
Holds results from running smap.Objects from the Class
Objects are not intended to be created directly but as a result from
running smap.Slots
.Data:- Object of class
"list" A list of objects
of class SMAPProfile-class. name:- Object of class
"character" The name of
the object.
Extends
Class "list", from data part.
Class "vector", by class "list".Methods
- Q
signature(object = "SMAPProfiles"): Returns the
optimal state sequence of the list elements.- observations
signature(object = "SMAPProfiles"):
Returns the observations of the list elements.- name
signature(object = "SMAPProfiles"): Returns the
name of the profile.- plot
signature(x = "SMAPProfiles", y = "missing"): A
plot method for the result profiles.
References
Andersson, R., Bruder, C. E. G., Piotrowski, A., Menzel, U., Nord, H.,
Sandgren, J., Hvidsten, T. R., Diaz de Stahl, T., Dumanski, J. P.,
Komorowski, J., A Segmental Maximum A Posteriori Approach to Array-CGH
Copy Number Profiling, submitted