thetahats

A function to compute the network centrality (i.e. total connectivity)
 of each microbial taxa from the association matrix.

'SOHPIE' (pronounced as SOFIE) is a novel pseudo-value regression approach for differential co-abundance network analysis of microbiome data, which can include additional clinical covariate in the model. The full methodological details can be found in Ahn S and Datta S (2023) <arXiv:2303.13702v1>.

Seungjun Ahn

SOHPIE

Statistical Approach via Pseudo-Value Information and Estimation

Somnath Datta

thetahats function

<dl><dt>asso.matinput</dt>
<dd>An input is an association matrix that is estimated from
the user-provided OTU data.</dd></dl>

Arguments

thetahats — thetahats

<dl>

<dt>asso.matinput</dt>
<dd>An input is an association matrix that is estimated from
the user-provided OTU data.</dd>

</dl>

thetahats: thetahats

Description

Usage

Value

Arguments