⚠️There's a newer version (1.6.0) of this package. Take me there.

#SemDist

R bioconductor package for computing semantic distance statistic for protein function predictors.

##File list/functions:

###computeIA.R : This file contains the computeIA function, which creates a file containing all of the information accretion data for the input (organism, ontology). Both inputs are strings.

###findRuMi.R : This file contains the computeMI and computeRU functions, which calculate the remaining uncertainty and misinformation for given sets of true and predicted terms in a specified ontology.

###gene2GO.R : Contains additional helper functions to load GO data.

###utilities.R : Contains helper functions to initialize package environemnts.

Copy Link

Version

Down Chevron

Version

1.2.0

License

GPL (>= 2)

Issues

Pull Requests

Stars

Forks

Maintainer

Last Published

September 4th, 2014

Functions in SemDist (1.2.0)