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SetTest (version 0.3.0)

Group Testing Procedures for Signal Detection and Goodness-of-Fit

Description

It provides cumulative distribution function (CDF), quantile, p-value, statistical power calculator and random number generator for a collection of group-testing procedures, including the Higher Criticism tests, the one-sided Kolmogorov-Smirnov tests, the one-sided Berk-Jones tests, the one-sided phi-divergence tests, etc. The input are a group of p-values. The null hypothesis is that they are i.i.d. Uniform(0,1). In the context of signal detection, the null hypothesis means no signals. In the context of the goodness-of-fit testing, which contrasts a group of i.i.d. random variables to a given continuous distribution, the input p-values can be obtained by the CDF transformation. The null hypothesis means that these random variables follow the given distribution. For reference, see [1]Hong Zhang, Jiashun Jin and Zheyang Wu. "Distributions and power of optimal signal-detection statistics in finite case", IEEE Transactions on Signal Processing (2020) 68, 1021-1033; [2] Hong Zhang and Zheyang Wu. "The general goodness-of-fit tests for correlated data", Computational Statistics & Data Analysis (2022) 167, 107379.

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Version

Install

install.packages('SetTest')

Monthly Downloads

206

Version

0.3.0

License

GPL-2

Maintainer

Hong Zhang

Last Published

July 15th, 2024

Functions in SetTest (0.3.0)

qbj

Quantile of Berk-Jones statistic under the null hypothesis.
test.bj

Multiple comparison test using Berk and Jones (BJ) statitics.
test.hc

Multiple comparison test using Higher Criticism (HC) statitics.
stat.phi.omni

calculate the omnibus phi-divergence statistics under general correlation matrix.
test.phi

Multiple comparison test using phi-divergence statistics.
stat.hc

Construct Higher Criticism (HC) statistics.
test.phi.omni

calculate the right-tail probability of omnibus phi-divergence statistics under general correlation matrix.
stat.bj

Construct Berk and Jones (BJ) statistics.
stat.phi

Construct phi-divergence statistics.
power.hc

Statistical power of Higher Criticism test.
qphi

Quantile of phi-divergence statistic under the null hypothesis.
pbj

CDF of Berk-Jones statitic under the null hypothesis.
power.bj

Statistical power of Berk and Jones test.
qhc

Quantile of Higher Criticism statistics under the null hypothesis.
pphi.omni

calculate the left-tail probability of omnibus phi-divergence statistics under general correlation matrix.
power.phi

Statistical power of phi-divergence test.
pphi

calculate the left-tail probability of phi-divergence under general correlation matrix.
phc

CDF of Higher Criticism statistic under the null hypothesis.