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Pull PCA cell embedding matrix
PCAEmbed(object, dims.use = NULL, cells.use = NULL)
Seurat object
Dimensions to include (default is all stored dims)
Cells to include (default is all cells)
PCA cell embedding matrix for given cells and PCs
# NOT RUN {
pbmc_small
head(PCAEmbed(pbmc_small))
# Optionally, you can specify subsets of dims or cells to use
PCAEmbed(pbmc_small, dims.use = 1:5, cells.use = pbmc_small@cell.names[1:5])
# }
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