GONNET

GONNETBF


  The GONNET mutation matrix and background frequency.


datasets

Pairwise evolutionary distance estimation between protein sequences with the TKF91 and TKF92 model, which consider all the possible paths of transforming from one sequence to another.

Ge Tan

Pairwise Distance Estimation with TKF91 and TKF92 Model

GONNET function

A 20*20 numeric matrix. A 20 numeric vector.

Format

Gonnet, G.H., Cohen, M.A., and Benner, S.A. (1992). Exhaustive matching of the entire protein sequence database. Science 256, 1443-1445.

GONNET: The GONNET AA matrix

Description

Usage

Arguments

Format

Source

Examples