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TR8 (version 0.9.11)

A tool for downloading functional traits data for plant species

Description

Plant ecologists often need to collect "traits" data about plant species which are often scattered among various databases: TR8 contains a set of tools which take care of automatically retrieving some of those functional traits data for plant species from publicly available databases (Biolflor, The Ecological Flora of the British Isles, LEDA traitbase, Ellenberg values for Italian Flora, Mycorrhizal intensity database). The TR8 name, inspired by "car plates" jokes, was chosen since it both reminds of the main object of the package and is extremely short to type.

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Version

Install

install.packages('TR8')

Monthly Downloads

228

Version

0.9.11

License

GPL (>= 2)

Issues

Pull Requests

Stars

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Maintainer

Gionata Bocci

Last Published

October 31st, 2014

Functions in TR8 (0.9.11)

Tr8-class

Class "Tr8"
TR8-package

TR8: a tool for retrieving functional traits data for plant species.
tr8_config

tr8_config a GUI to configure TR8 package.
biolflor_lookup

biolflor_lookup
available_traits

available_traits shows which traits are available for download
leda_lookup

List with reference variables needed to download traits from LEDA Traitbase
column_list

column_list
list_of_traits_Biolflor

list_of_traits_Biolflor
local_storage

A utility to storage a local copy of traits data
traits_eco

Set of functional traits to be retrieved by Ecoflora.
tr8

tr8: retrieving functional traits data from various databases.
available_tr8

A dataframe containing the traits available for download.
leda_download_to_local_directory

A utility to download a local copy of the LEDA data files.
ECOFLORA_df

ECOFLORA_df: local lookup table for Ecoflora species' url(s)
pignatti

pignatti
ref_PLANTS

ref_PLANTS
traits_pollen_Biolflor

traits_pollen_Biolflor
traits_special_Biolflor

traits_special_Biolflor